PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr7P21110_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 192aa    MW: 21377.8 Da    PI: 8.9504
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr7P21110_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.26e-13250455
                           HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                           +h ++Er+RR+++N+ +  Lr+l P+    + k+ + a+i   A+e+Ik+Lq
  GSMUA_Achr7P21110_001  2 SHIAVERNRRRQMNEHLKVLRTLTPSF---YIKRGDQASIIGGAIEFIKELQ 50
                           89************************9...9********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000835.01E-12154No hitNo description
PROSITE profilePS5088814.824149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.88E-16173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.3E-10250IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.8E-13261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.7E-11455IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009913Biological Processepidermal cell differentiation
GO:0010374Biological Processstomatal complex development
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MSHIAVERNR RRQMNEHLKV LRTLTPSFYI KRGDQASIIG GAIEFIKELQ QVLHSLEAKK  60
KRKSLSPSPT PSPRPLLQLT PSPTSSSPDT VKELGACCNS PVADVEAKLS GSNVLLRTLS  120
KRIPGQVVKI ITVLERQAFE ILHLNISSME DTVLYSFVIK IGLECQLSVE ELALEVQRSF  180
CEEIGYPRSL GE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009410405.11e-138PREDICTED: transcription factor MUTE-like
SwissprotQ9M8K69e-84MUTE_ARATH; Transcription factor MUTE
TrEMBLM0TJE81e-138M0TJE8_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr7P21110_0011e-137(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP111443441
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.14e-80bHLH family protein